BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037H01SP1|AL430445
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig604 1330 0.0
>3x_Contig604
Length = 2699
Score = 1330 bits (660), Expect = 0.0
Identities = 702/730 (96%)
Strand = Plus / Minus
Query: 170 aaragcgtatgagatttagtacacatgttttgtaacacaaaggraatccataaatrcgta 229
|| ||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 2059 aaaagcgtatgaaatttagtacacatgttttgtaacacaaaggaaatccataaatacgta 2000
Query: 230 cacttgaagagagtctaavactgttctacmatcagctttgctaatcattagrrttratcg 289
|||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||||
Sbjct: 1999 cacttgaagagagtctaaaactgttctacaatcagctttgctaatcattagaattaatcg 1940
Query: 290 ttttctttgacaaattgttttttgtacaagcgtttatctagtgaratkrtttcgctatct 349
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 1939 ttttctttgacaaattgttttttgtacaagcgtttatctagtgaaattatttcgctatct 1880
Query: 350 cccagatcattattgagtgatcgcgttttccttgtattgatgagtatcaratcacttttc 409
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1879 cccagatcattattgaatgatcgcgttttccttgtattgatgagtatcaaatcacttttc 1820
Query: 410 tggctatgattctgcvactgagaatcaacaaactttgaccgaccaatgactgttgataag 469
||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1819 tggctataattctgcaactgaaaatcaacaaactttgaccgaccaatgactgttgataag 1760
Query: 470 rrtgagaaakccattagtattttgtttccgcttcgrtctggrtccattaatgctccgact 529
||| ||| ||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 1759 aatgaaaaatccattagtattttgtttccgcttcgatctggatccattaatgctccgact 1700
Query: 530 gcgaatgccaagaccaggttttctagcaatgattccmacgatgatctggtaatacaaggg 589
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1699 gcaaatgccaagaccaggttttctagcaatgattccaacgatgatctggtaatacaaggg 1640
Query: 590 ctgartctagtaggaacagggctcaaacctcgctcccagaccctgcgatacatgagatca 649
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1639 ctgaatctagtaggaacagggctcaaacctcgctcccagaccctgcgatacatgaaatca 1580
Query: 650 cacaacttttcaactccgaacgttgattctacgcgacatgtttctaaaacggataaaatg 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 cacaacttttcaactccgaacgttgattctacgcgacatgtttctaaaacggataaaatg 1520
Query: 710 tgtttagcagacactcagctaccgtcagaacaagaaattgatgccaagtttgaagagtta 769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 tgtttagcagacactcagctaccgtcagaacaagaaattgatgccaagtttgaagagtta 1460
Query: 770 ttgaatggacatgcgtttctaggtactgctaagcaaaatttgaraagcttgtcgtatacc 829
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1459 ttgaatggacatgcgtttctaggtactgctaagcaaaatttgaaaagcttgtcgtatacc 1400
Query: 830 cgtaaatgggaattgattcagaaggaaaagaaactacatggtgatataacgatgcaagac 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1399 cgtaaatgggaattgattcagaaggaaaagaaactacatggtgatataacgatgcaagac 1340
Query: 890 gattcaaaat 899
||||||||||
Sbjct: 1339 gattcaaaat 1330
Score = 117 bits (58), Expect = 4e-26
Identities = 67/70 (95%)
Strand = Plus / Minus
Query: 3 tccaactcacgtgactagtatctatagattgtttcacgtgtcgcgtactgtttccttctg 62
|||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||
Sbjct: 2235 tccaactcacgtgactagtatctatagattgtttcaggtgtggggtactgtttccttctg 2176
Query: 63 gtctcttctt 72
||||||||||
Sbjct: 2175 gtctcttctt 2166
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.714 1.32
Gapped
Lambda K H
1.40 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5630
Number of Sequences: 1807
Number of extensions: 5630
Number of successful extensions: 119
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)